Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015788459.1_cds_XP_016464808.1_537
CDS Infomation

[gene=LOC107787687] [db_xref=GeneID:107787687] [protein=calcium-dependent protein kinase 13-like] [protein_id=XP_016464808.1] [location=complement(join(30320..30469,30558..30788,31556..31723,31803..31918,32812..32964,33069..33212,36330..36960))] [gbkey=CDS]
Sequence

ATGGGGAACTGCTGTAGATCTCCGGCAGCTGTAGCTAGAGAAGATGTAAAGTCATCTAAC
TACTCCGGCAACGATCACGGCCGGAAAGAGAAGTCCGGCAACAAGCAGAAACAGAAGCAG
ACCACTGTGTTAACTGATATAAAGAAGGAGAATATCGAGGAGAGGTATATAATTGATAGA
GAATTAGGCAGGGGTGAATTTGGAGTGACTTGCCTTTGCATCGATCGTAGCAATAGGGAT
GAATTGGCTTGCAAGTCGATTTCGAAGCGGAAGCTGAGGACGGCTGTGGATGTGGAGGAT
GTAAGGCGAGAAGTGGCGATTATGAAGCATTTGCCAAGGGATTCGAGTATTGTGAGGTTG
AAGGAGGCGTGTGAGGATGAGAATGCGGTGCATTTGGTTATGGAGTTGTGTGAGGGTGGG
GAGCTGTTTGATAGGATCGTGGCTCGGGGGCATTACACCGAACGAGCCGCTGCTGCTGTC
ACGCGGACGATTGTGGAGGTTGTGCAGCTCTGCCATAAGCATGGGGTGATCCATAGAGAC
TTAAAGCCTGAGAACTTTTTGTATGCTAATAAAAAGGAGAATTCACCTTTGAAAGCTATT
GATTTTGGATTATCGATTTTCTACAAGCCTGGTGAGAAGTTTTCTGAAATAGTTGGAAGC
CCTTACTATATGGCTCCAGAGGTGCTCAAACGGAACTATGGACCAGAAATAGATATATGG
AGTGCAGGAGTCATTTTATATATTTTGTTATGTGGAGTTCCTCCATTTTGGGCCGAATCT
GAGCAAGGAGTTGCCCAGGCCATCTTACGCGGGGCAATAGATTTCAAGCGTGAGCCCTGG
CCAAGTATTTCAGACAGTGCTAAGAATCTTGTACGGCACATGCTGGAGCCAGATCCAAAG
CTACGACTGACTGCAAAAGAAGTACTTGAACATCATTGGCTTCTAAATGCTAAGAAGGCT
CCAAATGTTCCTCTTGGAGATATGGTCAAGTCAAGACTTAAACAGTTCGCACTGATGAAT
AGGTTTAAGAGGAAAGCTCTCAGGGTGATTGCTGATTTCTTGTCTAATGAAGAAGTTGAA
GACCTCAGAGAAATGTTTAGCAAGATAGATACTGATAATGATGGCATTGTTTCTGTTGAA
GAACTAAAAGCTGGACTTCACAAGGTCAATTCACAGCTGGCGGAATCTGAAGTGAAGATG
CTTAATGAAGCCATTGATACTAACGGGAAAGGGACTCTGGACTATGGGGAATTTATCGCT
ATTTCACTCCATCTTCAAAGGATGGCAAATGATGAACATTTGCACAGAGCTTTCTCCTTC
TTCGACAAGGATAAAAATGGTTATATCGAACCAGACGAGCTTCGGCATGCATTGATGGAG
GACGGATCAGAGGACTGTACCAATGTTGCTAATGACATATTCCAGGAAGTTGATACGGAC
AAGGATGGCCGCATCAGCTATGACGAATTTACAGCGATGATGAAAACTGGGACAGATTGG
AGAAAGGCTTCTCGACATTACTCAAGAGGGAGATTTAATAGTCTGAGTGTGAAGCTAATG
AAGGATGGTTCACTTAACTTGGGGAATGAGTAA

Peptide Sequence

PEP ID

XP_016464808.1
PEP Infomation

PREDICTED: calcium-dependent protein kinase 13-like [Nicotiana tabacum]
Sequence

MGNCCRSPAAVAREDVKSSNYSGNDHGRKEKSGNKQKQKQTTVLTDIKKENIEERYIIDR
ELGRGEFGVTCLCIDRSNRDELACKSISKRKLRTAVDVEDVRREVAIMKHLPRDSSIVRL
KEACEDENAVHLVMELCEGGELFDRIVARGHYTERAAAAVTRTIVEVVQLCHKHGVIHRD
LKPENFLYANKKENSPLKAIDFGLSIFYKPGEKFSEIVGSPYYMAPEVLKRNYGPEIDIW
SAGVILYILLCGVPPFWAESEQGVAQAILRGAIDFKREPWPSISDSAKNLVRHMLEPDPK
LRLTAKEVLEHHWLLNAKKAPNVPLGDMVKSRLKQFALMNRFKRKALRVIADFLSNEEVE
DLREMFSKIDTDNDGIVSVEELKAGLHKVNSQLAESEVKMLNEAIDTNGKGTLDYGEFIA
ISLHLQRMANDEHLHRAFSFFDKDKNGYIEPDELRHALMEDGSEDCTNVANDIFQEVDTD
KDGRISYDEFTAMMKTGTDWRKASRHYSRGRFNSLSVKLMKDGSLNLGNE

Transcript Sequence

Gene sequence data has not been registered.